USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: H2A1C_HUMAN USC-OGP 2-DE database:  H2A1C_HUMAN H2A1C_HUMAN General information about the entry View entry in simple text format Entry name H2A1C_HUMAN Primary accession number Q93077 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Histone H2A type 1-C; AltName: Full=Histone H2A/l;. Gene name Name=HIST1H2AC Synonyms=H2AFL Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1333: pI=4.59; Mw=16158 SPOT OGP-1335: pI=5.02; Mw=16085 Cross-references UniProtKB/Swiss-Prot Q93077; H2A1C_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name H2A1C_HUMAN Primary accession number Q93077 Secondary accession number(s) B2R4F7 O00775 O00776 O00777 O00778 Q540R1 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 177) Name and origin of the protein Description RecName: Full=Histone H2A type 1-C; AltName: Full=Histone H2A/l; Gene name Name=HIST1H2AC Synonyms=H2AFL Encoded on Name=HIST1H2AC; Synonyms=H2AFL Keywords Acetylation; Chromosome; Citrullination; Complete proteome; DNA-binding; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL U90551; AAB53429.1; -; mRNA EMBL U91328; AAB82086.1; -; Genomic_DNA EMBL Z80778; CAB02540.1; -; Genomic_DNA EMBL AY131984; AAN59965.1; -; Genomic_DNA EMBL AK311811; BAG34754.1; -; mRNA EMBL CH471087; EAW55532.1; -; Genomic_DNA CCDS CCDS4585.1; -; . RefSeq NP_003503.1; NM_003512.3; . UniGene Hs.484950; -; . ProteinModelPortal Q93077; -; . SMR Q93077; -; . BioGrid 113930; 7; . IntAct Q93077; 17; . MINT MINT-1424122; -; . STRING 9606.ENSP00000321389; -; . iPTMnet Q93077; -; . PhosphoSitePlus Q93077; -; . SwissPalm Q93077; -; . BioMuta HIST1H2AC; -; . DMDM 12643341; -; . EPD Q93077; -; . MaxQB Q93077; -; . PaxDb Q93077; -; . PeptideAtlas Q93077; -; . PRIDE Q93077; -; . TopDownProteomics Q93077; -; . DNASU 8334; -; . Ensembl ENST00000314088; ENSP00000321389; ENSG00000180573; . Ensembl ENST00000377791; ENSP00000367022; ENSG00000180573; . Ensembl ENST00000602637; ENSP00000473534; ENSG00000180573; . GeneID 8334; -; . KEGG hsa:8334; -; . UCSC uc003ngm.4; human; . CTD 8334; -; . GeneCards HIST1H2AC; -; . HGNC HGNC:4733; HIST1H2AC; . HPA HPA041189; -; . MIM 602794; gene; . neXtProt NX_Q93077; -; . OpenTargets ENSG00000180573; -; . PharmGKB PA29110; -; . eggNOG KOG1756; Eukaryota; . eggNOG COG5262; LUCA; . GeneTree ENSGT00760000118934; -; . HOGENOM HOG000234652; -; . HOVERGEN HBG009342; -; . InParanoid Q93077; -; . KO K11251; -; . OMA KANSQEY; -; . OrthoDB EOG091G0XGD; -; . PhylomeDB Q93077; -; . TreeFam TF300137; -; . Reactome R-HSA-1221632; Meiotic synapsis; . Reactome R-HSA-171306; Packaging Of Telomere Ends; . Reactome R-HSA-201722; Formation of the beta-catenin:TCF transactivating complex; . Reactome R-HSA-212300; PRC2 methylates histones and DNA; . Reactome R-HSA-2299718; Condensation of Prophase Chromosomes; . Reactome R-HSA-2559580; Oxidative Stress Induced Senescence; . Reactome R-HSA-2559582; Senescence-Associated Secretory Phenotype (SASP); . Reactome R-HSA-2559586; DNA Damage/Telomere Stress Induced Senescence; . Reactome R-HSA-3214815; HDACs deacetylate histones; . Reactome R-HSA-3214847; HATs acetylate histones; . Reactome R-HSA-3214858; RMTs methylate histone arginines; . Reactome R-HSA-427359; SIRT1 negatively regulates rRNA Expression; . Reactome R-HSA-427389; ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression; . Reactome R-HSA-427413; NoRC negatively regulates rRNA expression; . Reactome R-HSA-5250924; B-WICH complex positively regulates rRNA expression; . Reactome R-HSA-5334118; DNA methylation; . Reactome R-HSA-5578749; Transcriptional regulation by small RNAs; . Reactome R-HSA-5617472; Activation of anterior HOX genes in hindbrain development during early embryogenesis; . Reactome R-HSA-5625886; Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3; . Reactome R-HSA-5689603; UCH proteinases; . Reactome R-HSA-5689880; Ub-specific processing proteases; . Reactome R-HSA-5689901; Metalloprotease DUBs; . Reactome R-HSA-606279; Deposition of new CENPA-containing nucleosomes at the centromere; . Reactome R-HSA-73728; RNA Polymerase I Promoter Opening; . Reactome R-HSA-73777; RNA Polymerase I Chain Elongation; . Reactome R-HSA-912446; Meiotic recombination; . Reactome R-HSA-977225; Amyloid fiber formation; . ChiTaRS HIST1H2AC; human; . GeneWiki HIST1H2AC; -; . GenomeRNAi 8334; -; . PRO PR:Q93077; -; . Proteomes UP000005640; Chromosome 6; . Bgee ENSG00000180573; -; . CleanEx HS_HIST1H2AC; -; . ExpressionAtlas Q93077; baseline and differential; . Genevisible Q93077; HS; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0000790; C:nuclear chromatin; IBA:GO_Central; . GO GO:0000786; C:nucleosome; IEA:UniProtKB-KW; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0003677; F:DNA binding; IBA:GO_Central; . GO GO:0006342; P:chromatin silencing; IBA:GO_Central; . GO GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB; . Gene3D 1.10.20.10; -; 1; . InterPro IPR009072; Histone-fold; . InterPro IPR002119; Histone_H2A; . InterPro IPR007125; Histone_H2A/H2B/H3; . InterPro IPR032454; Histone_H2A_C; . InterPro IPR032458; Histone_H2A_CS; . Pfam PF00125; Histone; 1; . Pfam PF16211; Histone_H2A_C; 1; . PRINTS PR00620; HISTONEH2A; . SMART SM00414; H2A; 1; . SUPFAM SSF47113; SSF47113; 1; . PROSITE PS00046; HISTONE_H2A; 1; .

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